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Plant Bioinformatics: Methods and Protocols by David Edwards

By David Edwards

The moment variation of this quantity makes a speciality of utilized bioinformatics with particular functions to plants and version vegetation. Plant Bioinformatics: tools and Protocols is geared toward plant biologists who've an curiosity in, or requirement for, gaining access to and manipulating large quantities of knowledge being generated by means of excessive throughput applied sciences. This publication could even be of curiosity to bioinformaticians and computing device scientists who would receive advantages from an creation to the several instruments and platforms on hand for plant examine. Written within the hugely profitable Methods in Molecular Biology series layout, chapters contain introductions to their respective issues, lists of the mandatory fabrics and software program, step by step, effectively reproducible protocols, and pointers on troubleshooting and keeping off identified pitfalls.

Authoritative and thorough, Plant Bioinformatics: tools and Protocols is helping researchers with the expanding quantity and variety of information from various crops and likewise the combination of a number of varied kinds of data.

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22 Eric W. Sayers and Ilene Karsch-Mizrachi Acknowledgements Funding for this work was provided by the Intramural Research Program of the National Institutes of Health, National Library of Medicine. References 1. Benson DA, Clark K, Karsch-Mizrachi I, Lipman DJ, Ostell J, Sayers EW (2014) GenBank. Nucleic Acids Res 42:D32–D37 2. Pakseresht N, Alako B, Amid C, CerdenoTarraga A, Cleland I, Gibson R, Goodgame N, Gur T, Jang M, Kay S et al (2014) Assembly information services in the European Nucleotide Archive.

Entry information”: (see Fig. uniprot. org/help/entry_information_section). In addition to the UniProtKB/Swiss-Prot 49 Fig. 22 Publications section of a UniProtKB entry. View of the “publications” section of the UniProtKB protein O80452 primary accession number, a protein entry may contain one or more secondary accession numbers, which follow the primary accession number. These are usually accession numbers of UniProtKB/TrEMBL entries that have been merged into a single UniProtKB/Swiss-Prot entry.

8. org/pub. 9. , Jasmonic acid-amido synthetase JAR1, entry Q9SKE2). 10. edu/, respectively. 11. mozilla. org/), the biobar navigation bar, dedicated to search into various 52 Emmanuel Boutet et al. mozilla. org/en-US/firefox/addon/biobar/. org, it allows searches to be performed in several databases hosted by ExPASy. 12. org/help/sequence-searches. 13. Your feedback is highly important and allows us to continuously improve our knowledgebase according to your needs. 14. , O80452). To face the fast increasing amount of new protein entries, an additional accession format extended to 10 alphanumerical characters for entries integrated after all 6 characters accessions will be used, possibly in 2014.

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